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Just wanted to poke this issue since it has been over a year since a comment was left and this issue still exists. I have recently been struggling with getting my custom shadow task to include the dependencies in the thick jar until I changed my configuration to use
project.configurations.implementation.canBeResolved = true
configurations = project.configurations.implementation »
Prior to this build, my team used Gradle 6 and used the deprecated compile and runtime dependency declarations. We had also pointed our custom shadow task to use configurations = project.configurations.runtime » After upgrading to Gradle 7 and v7.1.2 of this plugin, we began running into issues with our jars missing dependencies.
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sourceSets.main.scala.srcDir "src/main/java"
sourceSets.main.java.srcDirs = »
sourceSets.test.scala.srcDir "src/test/java"
sourceSets.test.java.srcDirs = »